STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1867Hypothetical protein; Contains a Phospholipid/glycerol acyltransferase domain. (234 aa)    
Predicted Functional Partners:
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
   
 0.767
plsY
DUF205-containing protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.618
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
  
 0.613
cce_1868
Hypothetical protein.
       0.592
cce_2063
Putative phosphatidate cytidylyltransferase.
     
  0.499
cce_1866
Conserved hypothetical protein.
       0.486
cce_3078
Polyketide synthase.
  
 
 0.485
cce_3079
Probable polyketide synthase.
  
 
 0.471
cce_1869
Hypothetical protein.
       0.414
cce_3077
AMP-dependent synthetase and ligase, probable acyl-CoA synthase.
   
 
 0.404
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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