STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1881Conserved hypothetical protein. (180 aa)    
Predicted Functional Partners:
cce_3950
Hypothetical protein; Contains DUF1232.
  
    0.819
cce_4184
Hypothetical protein; Contains DUF1232.
  
    0.806
cce_3128
Unknown.
  
     0.648
cce_1293
Unknown.
  
     0.644
cce_3965
Conserved hypothetical protein.
  
     0.537
cce_3800
Hypothetical protein; Contains a purine and other phosphorylases, family 1 domain.
  
     0.525
cce_1880
Unknown.
       0.509
cce_2867
Unknown.
  
     0.497
cce_2140
Unknown.
  
     0.496
cce_1545
rfrA family pentapeptide repeat.
  
     0.488
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.