Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_1906Hypothetical protein; Contains DUF86. (107 aa)    
Predicted Functional Partners:
cce_1151
Hypothetical protein; Contains a DNA polymerase, beta-like region.
 
  
 0.827
cce_1592
Hypothetical protein; Contains a DNA polymerase, beta-like region domain.
 
  
 0.823
cce_4349
Hypothetical protein; Contains a DNA polymerase, beta-like region domain.
 
  
 0.817
cce_1907
Hypothetical protein.
  
  
 0.816
cce_2418
Hypothetical protein; Contains a DNA polymerase, beta-like region domain.
 
  
 0.643
cce_4348
Hypothetical protein; Contains DUF86.
  
  
 
0.484
cce_1593
Hypothetical protein; Contains DUF86.
  
  
 
0.472
cce_1908
Conserved hypothetical protein.
       0.427
cce_2844
Hypothetical protein; Contains a DNA polymerase, beta-like region domain.
 
  
 0.421
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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