STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1935Conserved hypothetical protein. (240 aa)    
Predicted Functional Partners:
cce_1934
Putative adenylate/guanylate cyclase.
       0.803
cce_4179
Unknown.
  
     0.773
cce_2407
Unknown.
  
     0.772
cce_2740
Conserved hypothetical protein.
  
     0.769
cce_0456
Thioredoxin-like protein.
  
     0.767
cce_2701
Unknown; Contains a Lambda repressor-like, DNA-binding domain.
  
     0.767
cce_2199
Conserved hypothetical protein; Belongs to the UPF0367 family.
  
     0.766
cce_2029
Unknown; Contains an OstA-like protein domain.
  
     0.761
cce_1369
Unknown.
  
     0.755
cce_3743
Unknown.
  
     0.745
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.