STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apcFPhycobilisome core component. (169 aa)    
Predicted Functional Partners:
apcE
Phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.997
apcC
Phycobilisome LC linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 
 0.996
cpcG
Phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.990
cpcC1
Phycocyanin associated linker protein; Belongs to the phycobilisome linker protein family.
  
 
 
 0.986
apcD
allophycocyanin-B.
 
 
 
0.971
cpcC2
Phycocyanin associated linker protein; Belongs to the phycobilisome linker protein family.
  
 
 
 0.956
apcA
Allophycocyanin alpha subunit.
 
 
 
0.950
apcB
Allophycocyanin beta subunit.
  
 
 
0.943
cpcA
Phycocyanin alpha subunit.
  
 
 
0.942
cpcB
Phycocyanin beta subunit.
  
 
 
0.921
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.