STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1959Hypothetical protein; Contains a plasmid stabilization system domain. (86 aa)    
Predicted Functional Partners:
cce_1960
Unknown.
       0.773
cce_1703
Hypothetical protein; Contains a plasmid stabilization system domain.
  
     0.584
cce_1997
Hypothetical protein.
   
 
 0.568
cce_1957
Hypothetical protein; Contains UPF0150.
 
     0.556
cce_2898
Putative plasmid stabilization system protein.
  
     0.541
cce_0620
Hypothetical protein; Contains DUF29.
  
     0.535
obg
GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
     
 0.508
cce_1958
Hypothetical protein; Contains a YcfA domain.
  
    0.493
cce_4321
Hypothetical protein; Contains Helicase, C-terminal and DEAD/DEAH box helicase, N-terminal domains.
 
     0.446
cce_4067
Unknown; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.434
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.