STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1963Putative Rieske [2Fe-2S] domain-containing cell death suppressor protein. (465 aa)    
Predicted Functional Partners:
cce_2140
Unknown.
  
     0.592
lepB3
Signal peptidase I; Belongs to the peptidase S26 family.
       0.590
cce_1919
Conserved hypothetical protein.
 
   
 0.587
cce_0837
Conserved hypothetical protein.
  
     0.543
cce_4887
Hypothetical protein.
  
     0.538
cce_3147
Unknown; Contains a GTP-binding protein, HSR1-related domain.
  
     0.527
cce_0001
Hypothetical protein.
  
     0.519
cce_0117
Hypothetical protein.
  
     0.499
cce_1964
Unknown.
       0.492
cce_3259
Conserved hypothetical protein.
  
     0.464
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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