STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1971Unknown. (142 aa)    
Predicted Functional Partners:
ccmK1
Carbon dioxide concentrating mechanism protein.
    
 
 0.881
ccmK2
Carbon dioxide concentrating mechanism protein.
    
   0.853
ccmK4
Carbon dioxide concentrating mechanism protein.
    
   0.624
ccmK3
Carbon dioxide concentrating mechanism protein.
    
   0.624
ccmO
Carbon dioxide concentrating mechanism protein.
    
   0.624
cce_1972
Protein involved in disulfide bond formation.
       0.553
cce_3523
Unknown.
    
   0.489
btpA
Photosystem I biogenesis protein.
       0.452
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.