STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_1994Unknown. (734 aa)    
Predicted Functional Partners:
cce_4188
Unknown; Contains a polysaccharide export protein domain.
 
 
 0.992
cce_1803
Contains a polysaccharide export protein domain.
 
 
 0.987
cce_3429
Hypothetical protein; Contains Anti-Sigma-factor antagonist (STAS) and glycosyl transferase domains.
 
  
 0.949
cce_0127
Glucosyl transferase.
 
  
 0.923
cce_3092
Probable glycosyl transferase.
 
  
 0.923
cce_3234
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.912
cce_0253
Glycosyl transferase, family 2.
 
  
 0.817
cce_3996
Glycosyl transferase, group 1.
 
  
 0.794
cce_0126
Putative Glycosyl transferase, group 1.
 
  
 0.772
cce_0962
Hypothetical protein; Contains a glycosyl transferase, family 2 domain.
 
  
 0.757
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.