Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_2062Putative aldose 1-epimerase. (290 aa)    
Predicted Functional Partners:
cce_2063
Putative phosphatidate cytidylyltransferase.
       0.742
cce_2932
Putative galactose-1-phosphate uridyl transferase, class I.
  
 
 0.636
cce_2067
Carbohydrate kinase, FGGY family.
 
  
 0.628
cce_2064
rfrA family pentapeptide repeat.
       0.494
nagB
glucosamine-6-P isomerase.
 
   
 0.421
cce_2065
Unknown.
   
   0.417
cce_4356
Malate dehydrogenase (Oxaloacetate decarboxylating).
     
 0.415
cce_0944
Putative peptidase S13, D-Ala-D-Ala carboxypeptidase C.
  
    0.413
dacB
Probable D-alanyl-D-alanine carboxypeptidase.
  
    0.413
cce_2331
Putative D-alanyl-D-alanine carboxypeptidase.
  
    0.413
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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