STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2096Probable glycosyl transferase, family 2. (355 aa)    
Predicted Functional Partners:
cce_2097
Glycosyl transferase, group 1.
  
    0.785
cce_2098
Unknown.
       0.773
cce_2095
Unknown.
 
    0.757
cce_1170
Hypothetical protein; Contains a glycosyl transferase, family 2 domain.
  
     0.594
cce_2094
Hypothetical protein; Contains a Methyltransferase type 11 domain.
       0.509
galE1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.500
galE2
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.494
cce_2404
Hypothetical protein; Contains glycosyl transferase, family 2 and Methyltransferase FkbM domains.
 
  
 0.491
cce_2100
Probable glycosyl transferase.
  
    0.453
cce_2099
Hypothetical protein; Contains a methyltransferase, FkbM domain.
  
    0.424
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.