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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2102Hypothetical protein. (469 aa)    
Predicted Functional Partners:
cce_0763
Glycosyl transferase, family 2.
 
  
 0.795
cce_1921
Glycosyl transferase, group 1.
  
    0.789
cce_4724
Glycosyl transferase, family 2.
 
  
 0.779
cce_0617
Glycosyl transferase, group 1.
  
    0.763
cce_2101
Nucleotide sugar epimerase.
       0.661
cce_2100
Probable glycosyl transferase.
 
    0.655
cce_1468
Putative lipopolysaccharide biosynthesis.
 
  
 0.602
cce_1920
Putative glycosyl transferase.
 
   
 0.579
cce_4744
Unknown.
  
  
 0.576
cce_5036
Hypothetical protein; Contains a GCN5-related N-acetyltransferase domain.
  
     0.532
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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