STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2140Unknown. (253 aa)    
Predicted Functional Partners:
cce_3345
Conserved hypothetical protein.
  
     0.766
cce_3128
Unknown.
  
     0.742
cce_3085
Unknown; Contains a glyoxalase/bleomycin resistance protein/dioxygenase domain.
  
     0.741
cce_2867
Unknown.
  
     0.721
cce_2141
TRAP dicarboxylate transporter, DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
       0.709
cce_1919
Conserved hypothetical protein.
  
     0.696
cce_3147
Unknown; Contains a GTP-binding protein, HSR1-related domain.
  
     0.673
cce_2206
CHP02450-containing protein.
  
     0.672
cce_2662
Conserved hypothetical protein.
  
     0.663
cce_3360
Hypothetical protein; Contains a 2Fe-2S Ferredoxin-like domain.
 
     0.628
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.