STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2163Hypothetical protein. (1116 aa)    
Predicted Functional Partners:
cce_2196
WD-repeat protein.
 
     0.955
cce_1150
WD-repeat protein.
 
     0.934
cce_0149
Probable protein phosphatase.
    
 0.829
cce_1475
WD-repeat protein.
 
     0.812
cce_5005
Hypothetical protein; Contains Helicase, C-terminal, Type III restriction enzyme, res subunit and DEAD/DEAH box helicase, N-terminal domains.
   
 0.794
cce_2162
Hypothetical protein.
       0.773
cce_1131
Unknown; Contains a WD-40 repeat and a protein kinase.
 
     0.768
cce_3581
WD-40 repeat protein.
 
     0.723
cce_1075
Hypothetical protein; Contains a WD-40 repeat and peptidase C14, caspase catalytic subunit p20 domain.
 
   0.699
cce_4802
WD-repeat protein.
 
     0.677
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.