Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2174WD-40 repeat-containing serine/threonine protein kinase. (724 aa)    
Predicted Functional Partners:
cce_0149
Probable protein phosphatase.
 
 
 0.822
cce_0316
Probable serin-threonin phosphatase.
  
   0.821
cce_2930
Unknown; Contains a phosphatase 2C-like domain.
  
   0.811
cce_3614
Serine/threonine protein kinase.
  
     0.771
cce_2173
Hypothetical protein.
       0.714
cce_2175
Hypothetical protein; Contains Forkhead-associated, ferredoxin, and Oxidoreductase FAD/NAD(P)-binding domains.
   
   0.543
ycf4
Photosystem I assembly protein; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf4 family.
       0.525
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
     0.453
cce_3013
Hypothetical protein; Contains a WD-40 repeat and peptidase C14, caspase catalytic subunit p20.
     0.407
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.