STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2175Hypothetical protein; Contains Forkhead-associated, ferredoxin, and Oxidoreductase FAD/NAD(P)-binding domains. (491 aa)    
Predicted Functional Partners:
cce_3794
Putative globin-like protein; Belongs to the globin family.
  
 0.948
hcp
Putative Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.727
petF2
2Fe-2S ferredoxin.
 
   
 0.703
glsF
Ferredoxin-dependent glutamate synthase.
    
 
 0.691
petF3
2Fe-2S ferredoxin.
 
   
 0.650
petF4
2Fe-2S ferredoxin.
 
   
 0.647
cce_1185
Two-component hybrid sensor and regulator.
 
  
 0.588
cce_2174
WD-40 repeat-containing serine/threonine protein kinase.
   
   0.570
crtR
Beta-carotene hydroxylase.
 
  
 0.557
cce_0571
2Fe-2S ferredoxin, putative nitrogen fixation related protein.
 
   
 0.548
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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