Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_2192Putative HlyD-family secretion protein. (553 aa)    
Predicted Functional Partners:
cce_0891
Unknown; Contains an outer membrane efflux protein domain.
 
 
 0.979
hlyB1
Toxin secretion ABC transporter ATP-binding protein.
 
 
 0.966
cce_2355
Toxin secretion ABC transporter ATP-binding protein, HlyB family.
 
 
 0.938
hlyB2
Toxin secretion ABC transporter ATP-binding protein.
 
 
 0.936
cce_2194
Conserved hypothetical protein.
 
   
 0.873
hetC
ABC transporter ATP-binding protein.
 
 
 0.833
cce_0656
Two-component hybrid sensor and regulator.
  
 
 0.820
cce_1185
Two-component hybrid sensor and regulator.
  
 
 0.816
cce_2354
Unknown.
 
   
 0.811
cce_4114
devC-like ABC transporter permease protein.
 
 
 0.811
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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