Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hlyB1Toxin secretion ABC transporter ATP-binding protein. (995 aa)    
Predicted Functional Partners:
cce_2192
Putative HlyD-family secretion protein.
 
 
 0.966
hetC
ABC transporter ATP-binding protein.
 
  
 
0.921
cce_2355
Toxin secretion ABC transporter ATP-binding protein, HlyB family.
 
  
 
0.912
cce_2194
Conserved hypothetical protein.
 
   
 0.895
cce_3059
HlyD-family secretion protein.
 
 
 0.851
cce_2356
Putative secretion protein, HlyD family.
 
 
 0.850
cce_2354
Unknown.
 
   
 0.762
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
     
 0.687
cce_2678
HlyD-family secretion protein.
 
 
 0.679
trpE1
Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]
      
 0.662
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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