STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2203rfrA family pentapeptide repeat. (184 aa)    
Predicted Functional Partners:
cce_2204
Hypothetical protein.
 
    0.802
psbO
Photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII.
  
    0.714
cce_2205
Hypothetical protein; Contains a cell envelope-related transcriptional attenuator domain.
     
 0.709
cce_3754
Phytoene desaturase.
  
     0.647
cce_3752
Conserved hypothetical protein.
  
     0.641
cce_0492
Hypothetical protein; Contains rfrA pentapeptide repeat and TPR_1 tetratricopeptide repeat domains.
  
     0.628
cce_2202
Hypothetical protein.
       0.625
cce_4529
rfrA family pentapeptide repeat.
  
     0.624
cce_3102
rfrA family pentapeptide repeat.
  
     0.623
cce_2781
Putative NnrU protein.
  
     0.622
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.