STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2205Hypothetical protein; Contains a cell envelope-related transcriptional attenuator domain. (492 aa)    
Predicted Functional Partners:
cce_1662
Putative polysaccharide pyruvyl transferase.
 
     0.746
cce_3730
Unknown.
 
     0.715
cce_2203
rfrA family pentapeptide repeat.
     
 0.709
cce_2204
Hypothetical protein.
       0.671
cce_3998
Unknown.
  
     0.663
cce_4214
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.639
cce_1358
Probable glycosyl transferase, family 4.
 
  
 0.625
rffM
Probable UDP-N-acetyl-D-mannosaminuronic acid transferase; Belongs to the glycosyltransferase 26 family.
 
   
 0.618
cce_2206
CHP02450-containing protein.
 
     0.596
cce_2202
Hypothetical protein.
       0.547
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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