Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cce_2230ATP-binding protein of ABC transporter. (328 aa)    
Predicted Functional Partners:
cce_4605
Hypothetical protein; Contains DUF990.
 
  
 0.929
cce_4070
Hypothetical protein; Contains DUF990.
 
  
 0.919
cce_3056
ATP-binding protein of ABC transporter.
 
  
0.906
cysA
Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
    
0.854
cce_0276
ATP-binding protein of sugar ABC transportor; Belongs to the ABC transporter superfamily.
 
    
0.840
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
   0.801
cce_4521
ATP-binding protein of branched-chain amino acid ABC transporter.
 
     
0.749
cmpD
Bicarbontate transport system ATP-binding protein.
 
     
0.497
pepP2
Probable aminopeptidase P; Belongs to the peptidase M24B family.
       0.485
dfrA
Probable dihydrokaempferol 4-reductase.
       0.485
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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