Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccmN | cupB | cce_4279 | cce_2256 | Carbon dioxide concentrating mechanism protein. | Protein involved in constitutive low affinity CO2 uptake. | 0.786 |
| ccmN | cytM | cce_4279 | cce_3264 | Carbon dioxide concentrating mechanism protein. | Cytochrome cM. | 0.425 |
| ccmN | ndhM | cce_4279 | cce_1849 | Carbon dioxide concentrating mechanism protein. | NADH dehydrogenase subunit M; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. | 0.651 |
| ccmN | rbcX | cce_4279 | cce_3165 | Carbon dioxide concentrating mechanism protein. | Chaperonin-like protein RbcX. | 0.822 |
| cupB | ccmN | cce_2256 | cce_4279 | Protein involved in constitutive low affinity CO2 uptake. | Carbon dioxide concentrating mechanism protein. | 0.786 |
| cupB | cupS | cce_2256 | cce_1049 | Protein involved in constitutive low affinity CO2 uptake. | NDH-1S subunit, CO2 uptake Small protein. | 0.903 |
| cupB | cytM | cce_2256 | cce_3264 | Protein involved in constitutive low affinity CO2 uptake. | Cytochrome cM. | 0.798 |
| cupB | ndhF1 | cce_2256 | cce_2295 | Protein involved in constitutive low affinity CO2 uptake. | NADH dehydrogenase subunit 5. | 0.783 |
| cupB | ndhF3 | cce_2256 | cce_0603 | Protein involved in constitutive low affinity CO2 uptake. | NADH dehydrogenase subunit 5. | 0.935 |
| cupB | ndhF4 | cce_2256 | cce_1692 | Protein involved in constitutive low affinity CO2 uptake. | NADH dehydrogenase subunit 5. | 0.922 |
| cupB | ndhH | cce_2256 | cce_4717 | Protein involved in constitutive low affinity CO2 uptake. | NADH dehydrogenase subunit 7; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. | 0.880 |
| cupB | ndhL | cce_2256 | cce_2128 | Protein involved in constitutive low affinity CO2 uptake. | NADH dehydrogenase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. | 0.816 |
| cupB | ndhM | cce_2256 | cce_1849 | Protein involved in constitutive low affinity CO2 uptake. | NADH dehydrogenase subunit M; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. | 0.880 |
| cupB | rbcX | cce_2256 | cce_3165 | Protein involved in constitutive low affinity CO2 uptake. | Chaperonin-like protein RbcX. | 0.792 |
| cupS | cupB | cce_1049 | cce_2256 | NDH-1S subunit, CO2 uptake Small protein. | Protein involved in constitutive low affinity CO2 uptake. | 0.903 |
| cupS | ndhF1 | cce_1049 | cce_2295 | NDH-1S subunit, CO2 uptake Small protein. | NADH dehydrogenase subunit 5. | 0.406 |
| cupS | ndhF3 | cce_1049 | cce_0603 | NDH-1S subunit, CO2 uptake Small protein. | NADH dehydrogenase subunit 5. | 0.941 |
| cupS | ndhF4 | cce_1049 | cce_1692 | NDH-1S subunit, CO2 uptake Small protein. | NADH dehydrogenase subunit 5. | 0.541 |
| cupS | ndhH | cce_1049 | cce_4717 | NDH-1S subunit, CO2 uptake Small protein. | NADH dehydrogenase subunit 7; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. | 0.952 |
| cupS | ndhL | cce_1049 | cce_2128 | NDH-1S subunit, CO2 uptake Small protein. | NADH dehydrogenase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. | 0.694 |
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