STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2267Unknown; Contains a peptidase M50 domain. (502 aa)    
Predicted Functional Partners:
cce_2379
Bacterial surface antigen D15-like protein.
  
  
 0.767
murQ
Putative glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
       0.712
cce_2265
Unknown.
       0.704
cce_3570
Fibrillin.
  
     0.673
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
  
 0.659
cce_1173
Unknown.
  
    0.632
cce_0494
Unknown.
 
   
 0.590
cce_4698
Unknown.
  
     0.580
cce_0629
Putative CP12.
  
     0.568
cce_0288
Conserved hypothetical protein.
  
    0.549
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.