STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2304Hypothetical protein; Contains tetratricopeptide repeat domains. (771 aa)    
Predicted Functional Partners:
cce_2672
Conserved hypothetical protein.
  
 
   0.753
cce_3795
Hypothetical protein; Contains a methyltransferase type 11 domain.
  
     0.603
cce_3798
Hypothetical protein; Contains a cyclic nucleotide-binding domain and a winged helix repressor DNA-binding domain.
  
 
   0.593
cce_2058
Hypothetical protein; Contains a Chase2 domain.
  
     0.591
cce_2626
Unknown.
  
     0.581
cce_2814
Conserved hypothetical protein.
  
     0.577
cce_0322
Hypothetical protein; Contains a filamentous haemagglutinin, N-terminal domain.
  
     0.575
cce_1093
Hypothetical protein; Contains a TROVE domain.
  
    0.568
cce_4184
Hypothetical protein; Contains DUF1232.
  
     0.543
cce_5046
Hypothetical protein; Contains a filamentous haemagglutinin, N-terminal domain.
  
     0.526
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.