STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fur1Ferric uptake regulation protein; Belongs to the Fur family. (177 aa)    
Predicted Functional Partners:
fur4
Ferric uptake regulation protein; Belongs to the Fur family.
  
     0.767
fur3
Ferric uptake regulation protein; Belongs to the Fur family.
  
     0.752
fur2
Probable ferric uptake regulator; Belongs to the Fur family.
  
     0.681
surE1
Stationary-phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
      
 0.673
ho2
Heme oxygenase.
      
 0.673
phnE
Phosphonate ABC transporter, permease protein.
      
 0.671
phnD
Phosphonate ABC transporter, phosphate-binding protein.
      
 0.670
cce_0683
Putative transcriptional regulator.
  
    0.610
cce_2329
Hypothetical protein.
       0.610
ribA
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
      
 0.552
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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