Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cce_2355Toxin secretion ABC transporter ATP-binding protein, HlyB family. (997 aa)    
Predicted Functional Partners:
cce_2192
Putative HlyD-family secretion protein.
 
 
 0.938
cce_2356
Putative secretion protein, HlyD family.
 
 
 0.932
hetC
ABC transporter ATP-binding protein.
 
  
 
0.919
hlyB1
Toxin secretion ABC transporter ATP-binding protein.
 
  
 
0.912
cce_3059
HlyD-family secretion protein.
 
 
 0.859
pstB3
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.806
cce_2354
Unknown.
 
   
 0.773
cce_2194
Conserved hypothetical protein.
 
   
 0.759
cce_2678
HlyD-family secretion protein.
 
 
 0.705
pstB
ABC phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.622
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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