STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sucDPutative succinyl-CoA synthetase alpha chain. (306 aa)    
Predicted Functional Partners:
sucC
Putative succinyl-CoA synthetase beta chain.
 0.999
sdhB
Succinate dehydrogenase iron-sulphur protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 0.996
sdhA
Succinate dehydrogenase flavoprotein subunit.
 0.990
pdhC
Pyruvate dehydrogenase E2 component.
 
 0.978
hoxF
NADH dehydrogenase I chain F.
  
 
 0.972
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.944
cce_3228
Heterodisulfide reductase, subunit B.
 
  
 0.923
gltA
Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.890
pta
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.883
icd
Isocitrate dehydrogenase (NADP+).
 
  
 0.879
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.