STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2376Two-component response regulator. (329 aa)    
Predicted Functional Partners:
cce_1777
Probable two-component hybrid sensor and regulator.
 
 0.957
cce_0164
Two-component sensor histidine kinase.
 
 0.956
cce_4651
Hypothetical protein; Contains an EAL signaling domain.
 
 0.954
cce_2508
Two-component hybrid sensor and regulator.
 
 0.950
cce_2375
Two-component hybrid sensor and regulator.
 
0.926
cce_0656
Two-component hybrid sensor and regulator.
 
0.894
cce_1185
Two-component hybrid sensor and regulator.
 
0.891
cce_1555
Unknown; Contains a GAF domain.
 
     0.873
cce_1467
Two-component sensor histidine kinase.
 
     0.854
cce_4289
Two-component hybrid sensor and regulator.
 
0.844
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.