STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2449Unknown; Contains a glycoside hydrolase, family 57 domain. (777 aa)    
Predicted Functional Partners:
cce_2458
Conserved hypothetical protein.
  
    0.711
cce_2932
Putative galactose-1-phosphate uridyl transferase, class I.
     0.618
cce_2382
Conserved hypothetical protein.
  
     0.599
cce_2427
Hypothetical protein; Contains a Mo-dependent nitrogenase, C-terminal domain.
  
     0.535
glgA1
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
    0.522
cce_0073
Unknown.
  
     0.487
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
     0.447
cce_1114
Unknown.
  
     0.441
cce_0819
Conserved hypothetical protein.
  
     0.438
cce_2576
Hypothetical protein; Contains DUF820.
  
     0.427
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.