STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2451Unknown. (178 aa)    
Predicted Functional Partners:
cce_3344
Putative CAB/ELIP/HLIP family protein.
  
     0.726
cce_2214
Putative CAB/ELIP/HLIP family protein.
  
     0.666
cce_2452
UPF0187-containing protein.
       0.658
cce_2453
Penicillin-binding protein 1A.
       0.658
cce_2029
Unknown; Contains an OstA-like protein domain.
  
     0.655
cce_0904
Unknown; Contains a Homeodomain-like domain.
  
     0.630
cce_4302
Hypothetical protein; Contains an O-antigen polymerase domain.
  
     0.607
cce_3393
Unknown.
  
     0.574
cce_0366
Unknown.
  
     0.565
cce_3269
Unknown.
  
     0.551
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.