Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2471Putative adenine specific DNA methyltransferase. (400 aa)    
Predicted Functional Partners:
cce_2470
Hypothetical protein.
       0.709
cce_4380
Putative Cl- channel, voltage gated.
  
     0.648
cce_1102
Putative helicase.
  
     0.639
cce_3259
Conserved hypothetical protein.
  
     0.544
cce_3565
Conserved hypothetical protein.
  
     0.504
cce_2472
Unknown; Contains a beta-Ig-H3/fasciclin domain.
       0.485
cce_3368
Unknown.
  
     0.483
cce_3453
Unknown.
  
     0.444
cce_2469
Unknown; Contains DUF820.
  
     0.428
cce_0985
Hypothetical protein; Contains DUF820.
  
     0.420
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.