STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2502Putative CsbD-like protein; Belongs to the UPF0337 (CsbD) family. (60 aa)    
Predicted Functional Partners:
cce_4648
Hypothetical protein; Contains photosynthetic reaction center H-chain cytoplasmic and CHP2271 C-terminal domains.
 
    0.757
cce_1795
Conserved hypothetical protein.
  
     0.741
cce_4731
Hypothetical protein; Contains a metallophosphoesterase domain.
  
     0.702
psbX
Photosystem II protein X; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
  
     0.652
cce_3428
Hypothetical protein.
  
    0.636
cce_2057
Unknown.
  
     0.599
cce_0478
Conserved hypothetical protein.
  
     0.596
cce_3734
Unknown.
  
     0.590
cce_2045
Unknown; Contains a TPR-like helical domain.
  
     0.584
cce_0807
Putative alpha-glucanotransferase.
  
    0.574
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.