STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2506Unknown. (138 aa)    
Predicted Functional Partners:
cce_1795
Conserved hypothetical protein.
  
     0.766
cce_4648
Hypothetical protein; Contains photosynthetic reaction center H-chain cytoplasmic and CHP2271 C-terminal domains.
  
     0.756
cce_1402
Hypothetical protein; Contains a glycosyl transferase, family 39 domain.
  
     0.720
cce_4447
Conserved hypothetical protein.
  
     0.632
cce_2057
Unknown.
  
     0.616
cce_2880
Conserved hypothetical protein.
  
     0.602
cce_3095
Conserved hypothetical protein.
  
     0.602
cce_2507
Two-component response regulator.
       0.584
cce_3582
Conserved hypothetical protein.
  
     0.513
psbX
Photosystem II protein X; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
  
     0.509
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.