STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2516DUF218-containing protein. (197 aa)    
Predicted Functional Partners:
cce_0108
Conserved hypothetical protein.
  
     0.764
cce_1528
Conserved hypothetical protein.
  
     0.731
cce_0820
Unknown.
  
     0.714
cce_1844
Unknown; Contains an EF-Hand type domain.
  
     0.712
cce_2694
Unknown; Contains a nucleic acid-binding, OB-fold domain.
  
     0.704
cce_0465
Conserved hypothetical protein.
 
    0.703
cce_0950
Conserved hypothetical protein.
  
     0.695
cce_4302
Hypothetical protein; Contains an O-antigen polymerase domain.
 
     0.693
cce_2407
Unknown.
  
     0.669
cpcF
Phycocyanin alpha-subunit phycocyanobilin lyase.
  
     0.659
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.