STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_25474'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (241 aa)    
Predicted Functional Partners:
cce_3761
Polyketide synthase.
 
 0.985
cce_3080
Polyketide synthase type I.
 
 0.980
cce_3078
Polyketide synthase.
 
 0.977
cce_3074
Polyketide synthase type I.
 
 0.972
cce_3079
Probable polyketide synthase.
 
 0.971
cce_3042
Peptide synthetase.
 
 0.935
cce_3055
Peptide synthetase.
 
 0.923
cce_3070
Peptide synthetase.
 
 0.911
coaE
Putative Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.908
cce_4620
DUF479-containing protein.
     
  0.900
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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