STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnCPhosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (249 aa)    
Predicted Functional Partners:
phnD
Phosphonate ABC transporter, phosphate-binding protein.
 
 
 0.993
phnE
Phosphonate ABC transporter, permease protein.
 
 0.991
cce_0690
Probable phosphonate ABC transporter, phosphate-binding protein.
 
 
 0.985
cce_0769
Putative periplasmic phosphonate binding protein component.
 
 
 0.983
cce_2989
Hypothetical protein; Contains DUF214.
 
      0.899
cce_3090
Putative ABC transporter permease protein.
 
      0.898
cce_3057
Probable ABC transporter permease protein.
 
      0.896
cce_2560
D-isomer specific 2-hydroxyacid dehydrogenase.
 
   
 0.707
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
      
 0.673
cce_3494
Glycerophosphoryl diester phosphodiesterase; Belongs to the alkaline phosphatase family.
  
  
 0.517
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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