STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2567Hypothetical protein; Contains an Armadillo-like helical domain. (1201 aa)    
Predicted Functional Partners:
cce_3526
Conserved hypothetical protein.
  
     0.700
cce_3451
Unknown.
  
     0.689
cce_3645
Putative peptidase C14, caspase catalytic.
 
     0.668
cce_0205
Hypothetical protein.
  
    0.656
cce_1419
Unknown; Contains DUF1400.
  
     0.638
cce_3628
Unknown.
 
     0.636
cce_3002
Hypothetical protein.
  
     0.627
cce_4660
Hypothetical protein; Contains a WD-repeat, a PAS region and a response regulator receiver domain.
 
     0.605
cce_2210
Unknown.
  
     0.604
cce_0449
Unknown.
 
     0.595
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.