STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiEUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol. (248 aa)    
Predicted Functional Partners:
ndbB
Type 2 NADH dehydrogenase.
     
  0.900
cce_4052
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
  0.900
cce_4406
Probable NADH dehydrogenase.
     
  0.900
cce_2993
Methyltransferase type 11/UbiE/COQ5 methyltransferase.
  
     0.657
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
 
   
 0.647
cce_2524
Unknown; Contains a methyltransferase type 11 domain.
  
     0.642
cce_2569
DUF445-containing protein.
       0.562
sqdX
Probable sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein.
 
      0.508
cce_2123
Hypothetical protein; Contains a Methyltransferase type 11 domain.
  
     0.477
menE
O-succinylbenzoic acid CoA ligase.
  
   
 0.461
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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