Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2596Hypothetical protein; Contains a Lipolytic enzyme, G-D-S-L domain. (309 aa)    
Predicted Functional Partners:
cce_2926
Unknown.
  
     0.772
cce_0253
Glycosyl transferase, family 2.
 
    0.763
cce_5046
Hypothetical protein; Contains a filamentous haemagglutinin, N-terminal domain.
  
 
 0.759
cce_3334
Glycosyl transferase, family 2.
  
     0.756
cce_1994
Unknown.
 
   
 0.753
cce_0126
Putative Glycosyl transferase, group 1.
  
     0.746
cce_4931
Hypothetical protein; Contains a filamentous haemagglutinin, N-terminal domain.
  
 
 0.746
cce_4589
Glycosyl transferase, group 1.
  
     0.742
cce_3174
Transcriptional regulator.
  
     0.735
cce_0962
Hypothetical protein; Contains a glycosyl transferase, family 2 domain.
  
     0.724
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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