STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2608Conserved hypothetical protein. (140 aa)    
Predicted Functional Partners:
cce_1616
Hypothetical protein; Contains a glycosyl transferase, family 39 domain.
  
     0.566
cce_3978
Hypothetical protein; Contains DUF1400.
  
     0.547
cce_3003
Conserved hypothetical protein.
  
     0.515
cce_3314
CHP02587-containing protein.
  
     0.510
cce_3748
Unknown.
  
     0.474
cce_2451
Unknown.
  
     0.462
gcvP
Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
       0.449
cce_0256
Conserved hypothetical protein.
  
     0.447
cce_1395
Unknown; Contains a glycosyl transferase, family 10 domain.
  
     0.447
cce_4731
Hypothetical protein; Contains a metallophosphoesterase domain.
  
     0.429
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.