STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2632Iron transport protein. (383 aa)    
Predicted Functional Partners:
futB
iron(III) ABC transporter permease protein.
 
 
 0.991
cce_3801
Putative iron(III)-transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.964
exbB2
Putative biopolymer transport protein.
  
  
 0.575
fur2
Probable ferric uptake regulator; Belongs to the Fur family.
     
 0.513
cce_2633
Putative outer membrane protein; Belongs to the OprB family.
       0.507
petF1
2Fe-2S ferredoxin.
      
 0.505
cce_3033
Hypothetical protein; Contains a serralysin-like metalloprotease, C-terminal domain.
   
  
 0.489
psbT
Photosystem II protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.
      
 0.485
cce_1720
Hypothetical protein; Contains a Peptidase aspartic, catalytic domain.
      
 0.485
cce_4108
Conserved hypothetical protein.
      
 0.485
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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