STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2663Hypothetical protein; Contains a peptidase M23B domain. (216 aa)    
Predicted Functional Partners:
cce_1814
Putative peptidoglycan-binding peptidase, M23B family.
  
     0.757
cce_2360
Hypothetical protein; Contains a Peptidase M23B and Peptidoglycan-binding domain.
  
     0.753
cce_5021
Hypothetical protein; Contains a peptidase M23B.
  
     0.747
cce_0720
Putative peptidoglycan-binding peptidase, M23B family.
  
     0.744
slt
Probable soluble lytic transglycosylase.
 
  
 0.648
cce_2662
Conserved hypothetical protein.
 
     0.555
cce_2664
Hypothetical protein; Contains a cupin, RmlC-type domain.
       0.495
msrA1
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.486
cce_2660
Hypothetical protein.
       0.482
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.