Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_2599 | cce_2682 | cce_2599 | cce_2682 | Putative membrane protein. | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | 0.405 |
| cce_2680 | cce_2681 | cce_2680 | cce_2681 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.609 |
| cce_2680 | cce_2682 | cce_2680 | cce_2682 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | 0.603 |
| cce_2680 | cce_2684 | cce_2680 | cce_2684 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Putative PfkB. | 0.575 |
| cce_2680 | rsmI | cce_2680 | cce_2683 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.563 |
| cce_2681 | cce_2680 | cce_2681 | cce_2680 | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.609 |
| cce_2681 | cce_2682 | cce_2681 | cce_2682 | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | 0.774 |
| cce_2681 | cce_2684 | cce_2681 | cce_2684 | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Putative PfkB. | 0.534 |
| cce_2681 | rsmI | cce_2681 | cce_2683 | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.767 |
| cce_2682 | cce_2599 | cce_2682 | cce_2599 | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | Putative membrane protein. | 0.405 |
| cce_2682 | cce_2680 | cce_2682 | cce_2680 | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.603 |
| cce_2682 | cce_2681 | cce_2682 | cce_2681 | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.774 |
| cce_2682 | cce_2684 | cce_2682 | cce_2684 | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | Putative PfkB. | 0.534 |
| cce_2682 | cce_4345 | cce_2682 | cce_4345 | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | Putative membrane protein. | 0.425 |
| cce_2682 | rsmI | cce_2682 | cce_2683 | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.718 |
| cce_2684 | cce_2680 | cce_2684 | cce_2680 | Putative PfkB. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.575 |
| cce_2684 | cce_2681 | cce_2684 | cce_2681 | Putative PfkB. | Putative dihydrouridine synthase TIM-barrel protein nifR3; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.534 |
| cce_2684 | cce_2682 | cce_2684 | cce_2682 | Putative PfkB. | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | 0.534 |
| cce_2684 | rsmI | cce_2684 | cce_2683 | Putative PfkB. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.609 |
| cce_4345 | cce_2682 | cce_4345 | cce_2682 | Putative membrane protein. | Hypothetical protein; Contains a TRAP transporter solute receptor, TAXI family domain. | 0.425 |
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