Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
cce_2690DegT/DnrJ/EryC1/StrS aminotransferase family enzyme; Belongs to the DegT/DnrJ/EryC1 family. (379 aa)    
Predicted Functional Partners:
cce_2688
Hypothetical protein.
       0.705
cce_2689
Unknown; Contains a bacterial regulatory protein, MerR domain.
       0.705
cce_0799
Oxidoreductase.
 
  
 0.631
cce_3750
Unknown; Contains an oxidoreductase domain.
 
  
 0.619
cce_2691
Unknown.
  
    0.516
rfbA
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.484
cce_2061
Mannose-1-phosphate guanyltransferase.
  
  
 0.480
aspC
Aspartate aminotransferase.
     
 0.438
cce_2692
Unknown; Contains a UspA domain.
       0.428
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.426
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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