Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2691Unknown. (465 aa)    
Predicted Functional Partners:
cce_3792
Hypothetical protein.
  
     0.698
cce_2448
Putative chromosome partitioning protein, ParA family.
  
 
   0.682
cce_3793
Integrase.
  
     0.658
cce_1368
Hypothetical protein.
  
     0.647
aspC
Aspartate aminotransferase.
  
    0.636
cce_2692
Unknown; Contains a UspA domain.
       0.634
cce_3124
Unknown.
  
    0.632
rpl34
50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
  
     0.600
cce_2950
Conserved hypothetical protein.
  
     0.587
cce_1965
Hypothetical protein.
  
     0.571
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.