Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_2719Flavin oxidoreductase/NADH oxidase. (368 aa)    
Predicted Functional Partners:
cce_4739
Putative zinc-binding oxidoreductase.
  
 0.702
tufA
Elongation factor EF-Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.586
cce_3078
Polyketide synthase.
  
  
 0.534
cce_3077
AMP-dependent synthetase and ligase, probable acyl-CoA synthase.
  
 
 0.528
cce_2718
Putative DoxX.
  
    0.520
cce_3079
Probable polyketide synthase.
  
  
 0.506
cce_2720
Hypothetical protein.
       0.505
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
  
 0.439
cce_3587
Probable zinc-binding oxidoreductase.
  
 0.438
rps1-1
30S ribosomal protein S1.
   
  
 0.435
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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