STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2731Probable cyclopropane-fatty-acyl-phospholipid synthase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family. (329 aa)    
Predicted Functional Partners:
cce_0241
Hypothetical protein; Contains a UbiA prenyltransferase domain.
     
  0.900
cce_3689
Conserved hypothetical protein.
     
  0.900
psaJ
Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.
  
     0.604
cce_2730
Hypothetical protein.
       0.514
cce_0772
Unknown; Contains a FAD dependent oxidoreductase domain.
  
    0.501
cce_2732
Hypothetical protein.
       0.494
cce_0280
Unknown.
  
     0.461
cce_2439
Hypothetical protein; Contains a TrkA-N domain.
  
     0.430
cce_5196
Hypothetical protein; Contains a TrkA-N domain.
  
     0.429
cce_1496
Hypothetical protein.
  
     0.415
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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