STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2764Hypothetical protein; Contains a peptidase M28 domain. (282 aa)    
Predicted Functional Partners:
cce_0071
Unknown; Contains a GTP-binding protein, HSR1-related domain.
  
 
  0.536
cce_1666
Contains a GTP-binding protein, HSR1-related domain.
  
 
  0.536
cce_0467
Conserved hypothetical protein.
  
 
  0.523
cce_2919
Hypothetical protein; Contains an Armadillo-like helical domain.
  
     0.523
cce_2762
Unknown; Contains a lipase, class 3 domain.
       0.513
cce_2763
Hypothetical protein.
       0.513
cce_2420
ATP-binding protein of ABC transporter.
  
  
 0.482
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.465
cce_4708
Putative small GTP-binding protein.
    
  0.457
cce_0180
Cardiolipin synthase-like protein.
    
 0.428
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.