Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_2799Glycosyl transferase. (406 aa)    
Predicted Functional Partners:
cce_2798
Conserved hypothetical protein.
     0.954
cce_2800
Glycosyl transferase, group 1.
    
0.882
cce_2801
ABC transporter, ATP-binding protein.
 
 
   0.861
cce_4538
Hypothetical protein.
  
     0.588
cce_2802
Contains a Protein kinase-like domain.
       0.453
cce_1806
Putative glycoside hydrolase, family 13.
  
  0.441
cce_3744
Putative Glycosyl transferase, group 1.
  
     0.430
cce_0763
Glycosyl transferase, family 2.
  
    0.407
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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