STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2835Hypothetical protein; Contains UPF0150. (68 aa)    
Predicted Functional Partners:
cce_2848
Hypothetical protein; Contains a YcfA domain.
 
 
   0.811
cce_2847
Hypothetical protein; Contains UPF0150.
  
     0.753
cce_3063
Hypothetical protein; Contains UPF0150.
  
     0.710
cce_3064
Hypothetical protein; Contains a YcfA domain.
  
 
   0.686
cce_1505
Hypothetical protein; Contains UPF0150.
  
     0.602
cce_2178
Hypothetical protein; Contains a YcfA domain.
  
 
   0.593
cce_1219
Hypothetical protein; Contains aYcfA domain.
  
 
   0.589
cce_2833
Hypothetical protein.
       0.559
cce_2834
Hypothetical protein.
       0.559
cce_4364
Hypothetical protein; Contains UPF0150.
  
     0.488
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.